Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852183.1_cds_XP_016511749.1_24458
CDS Infomation

[gene=LOC107828875] [db_xref=GeneID:107828875] [protein=uncharacterized protein LOC107828875] [protein_id=XP_016511749.1] [location=join(5468..5653,5841..5866,5920..6412,6556..6654,7053..7582,7756..7899,7998..8055)] [gbkey=CDS]
Sequence

ATGGCTGATGGTGCTAGAATTTTTGAACTTAAGAAGGAGTTATCTCACATTGCTCAGGGT
CCTTTGGACATTGCCTCCTATTTCAACAAAATAAAACAACTTTGGGATGAAATAGCTTCC
ATTTCTGTTAATCACCTCTCTGTATGCACATGTGGGGGAAATAAGAAAGTTGAGGAAGAG
CAGAAGTGTCCAAACAATCCTTCCCATCTAAGGTACAGTAAGAAATCAGGGCATTCTATT
GAAAAGTGCTACAAGCTGCATGGTTTTCCTCAGAATTTCAAGTTCACTAAAGGTAATACA
CCTAGGAGAACTGCAACACATGTTGAGGTTCAATCTCCTGTTAACTCTGATGAGATTGGA
AATGGTGGTGGTCCTGTCATGCATGCTGAATCTGAGCAGCTTTACACTTTGCCTGGGTTG
ACTAAGGATCAATACTCCCAGTTGATCACTCTGCTTCAACAGTCTCACATTTCTGCTTCT
CTTGCTACTCTAAATATTTTGGCTTCTACTAATTTTGCTGGTAAGTTGTTGCCTGAGAAT
GGTTTGTTCAGAACTTGTTTACTTACTAAGATAGAGAATACTATTTTGATCATAGATTCT
GGAGCATCTGATCATATGACCTTTGATAAATCCATTCTCTTTGATAATCAGACTCTGCCC
ATCCCTTACTTAGTTTCGGTTATAAAGTTAGAGTTACCAATATTGGGCCCTTCACTAAAG
AAGCCATTGGTGCTTGGTAGACCAGACAATGGGCTTTACAAGCTGTTTCAACTTCCTGCA
AATTCTGGCCCTTTATGTTGTCATAGCTACTTGGACCATCTCCTAGGGTCCAAAAACAAT
GCCTTTGATATGTTGAAAGCCTTCATTGCCATGTTAGAAACTCATTTTCACACCAAGGTG
CAAACTGTAAGAAGTGATAATGCATTAGAATTGGGGTCTAGTCTTTCAGGTTCTCAATAT
TTCTCTGATAAGGGAATTGTGCATCAAACCTCTTGTCCTCATACTCCTCAACAAAATGGG
GTGGTGGAGAGGAAGCATAGACACTTGCTTGATACTGCTAGGGCTTTACTTTTTCAGTCC
CATCTTCCCATTAGATTCTGGGGTGATTGTATCTTGACAGCTACCTATTTGATCAATAGG
TTTCCTTCTCCCCTTCTGTCTCACAAGAGTCCTTTTGAACTTCTTTATGATAAGCCTCCT
TCTTACTCACATCTTAGAGCTTTTGGATGTCTTTGTTATTCTACTGTGCCTAAACCTCAT
AGAGATAAATTCCAACCAAGGGTTGTACCATGTGTGCTTGTGGAGTATCCTTTTGCTAAG
AAAGGCTACAAGTTGTGCAAGCCCTATCTCTTTTTTTTTCCTTCTGTTCCTTCTGTTTCC
ACTCCTCCTTCTTCCTCTTCTGCACATTCACCTTCACCTTCTTCATCTCATTCTCATGCT
TCATCATCTCTTTCTCCTGCTCCTCCTCCTTTAAGAAGTCAGTTGCCTATTCTTGAGCCT
TCAACTTATTCTCAGGTAGCAGTTGTTCCAGAATGA

Peptide Sequence

PEP ID

XP_016511749.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107828875 [Nicotiana tabacum]
Sequence

MADGARIFELKKELSHIAQGPLDIASYFNKIKQLWDEIASISVNHLSVCTCGGNKKVEEE
QKCPNNPSHLRYSKKSGHSIEKCYKLHGFPQNFKFTKGNTPRRTATHVEVQSPVNSDEIG
NGGGPVMHAESEQLYTLPGLTKDQYSQLITLLQQSHISASLATLNILASTNFAGKLLPEN
GLFRTCLLTKIENTILIIDSGASDHMTFDKSILFDNQTLPIPYLVSVIKLELPILGPSLK
KPLVLGRPDNGLYKLFQLPANSGPLCCHSYLDHLLGSKNNAFDMLKAFIAMLETHFHTKV
QTVRSDNALELGSSLSGSQYFSDKGIVHQTSCPHTPQQNGVVERKHRHLLDTARALLFQS
HLPIRFWGDCILTATYLINRFPSPLLSHKSPFELLYDKPPSYSHLRAFGCLCYSTVPKPH
RDKFQPRVVPCVLVEYPFAKKGYKLCKPYLFFFPSVPSVSTPPSSSSAHSPSPSSSHSHA
SSSLSPAPPPLRSQLPILEPSTYSQVAVVPE

Transcript Sequence

Gene sequence data has not been registered.